Skip to main content

Table 2 List of publications used in the analysis of ls-DMPs and inflammatory disease

From: Leukocyte-specific DNA methylation biomarkers and their implication for pathological epigenetic analysis

Publication

Trait

Tissue

Data type

HOXA3 or MAP4K1 included

Chandra et al., 2018 [21]

Psoriasis

Skin

450 k methylation bead array

HOXA3

Zhou et al., 2015 [26]

Psoriasis

Skin

450 k methylation bead array

HOXA3 and MAP4K1

Verma et al., 2018 [27]

Psoriasis

Skin

Reduced representation bisulfite sequencing

HOXA3

Agliata et al., 2020 [22]

IBD

Colonic mucosa and purified IEC

450 k methylation bead array meta-analysis

HOXA3 and MAP4K1

Harris et al., 2020 [28]

IBD

Colonic mucosa

450 k methylation bead array

HOXA3

Zhang et al., 2020 [23]

AD

PFC

450 k methylation bead array meta-analysis

HOXA3 and MAP4K1

Gasparoni et al., 2018 [29]

AD

PFC

450 k methylation bead array

HOXA3 and MAP4K1

Smith et al., 2018 [30]

AD

PFC and STG

450 k methylation bead array meta-analysis

HOXA3 and MAP4K1

Li et al., 2020 [31]

AD

STG and IFG

EPIC array

HOXA3

Jager et al., 2014 [32]

AD

PFC

450 k methylation bead array

HOXA3

Altuna et al., 2019 [33]

AD

Hippocampus

450 k methylation bead array and bisulfite sequencing

HOXA3 and MAP4K1

Smith et al., 2021 [34]

AD

PFC, STG, MTG, EC, Cerebellum

450 k methylation bead array meta-analysis

HOXA3 and MAP4K1

  1. List of publications used in the analysis of ls-DMPs and inflammatory disease. IDB inflammatory bowel disease, AD Alzheimer disease, IEC intestinal epithelial cells, PFC prefrontal cortex, STG superior temporal gyrus, IFG inferior frontal gyrus, MTG middle temporal gyrus, EC entorhinal cortex